C.R. Woese, "On the evolution of cells," Proceedings of the National Academy of Sciences, 99:8742-7, June 25, 2002. 

Public release date: 17-Jun-2002
Contact: Jim Barlow
b-james3@uiuc.edu
217-333-5802
University of Illinois at Urbana-Champaign
http://www.uiuc.edu/

New cellular evolution theory rejects Darwinian assumptions

CHAMPAIGN, Ill. - Life did not begin with one primordial cell. Instead, there
were initially at least three simple types of loosely constructed cellular
organizations. They swam in a pool of genes, evolving in a communal way that
aided one another in bootstrapping into the three distinct types of cells by
sharing their evolutionary inventions.

The driving force in evolving cellular life on Earth, says Carl Woese, a
microbiologist at the University of Illinois at Urbana-Champaign, has been
horizontal gene transfer, in which the acquisition of alien cellular
components, including genes and proteins, work to promote the evolution of
recipient cellular entities.

Woese presents his theory of cellular evolution, which challenges long-held
traditions and beliefs of biologists, in the June 18 issue of the Proceedings
of the National Academy of Sciences.

Cellular evolution, he argues, began in a communal environment in which the
loosely organized cells took shape through extensive horizontal gene transfer.
Such a transfer previously had been recognized as having a minor role in
evolution, but the arrival of microbial genomics, Woese says, is shedding a
more accurate light. Horizontal gene transfer, he argues, has the capacity to
rework entire genomes. With simple primitive entities this process can
"completely erase an organismal genealogical trace."

His theory challenges the longstanding Darwinian assumption known as the
Doctrine of Common Descent - that all life on Earth has descended from one
original primordial form.

"We cannot expect to explain cellular evolution if we stay locked in the
classical Darwinian mode of thinking," Woese said. "The time has come for
biology to go beyond the Doctrine of Common Descent."

"Neither it nor any variation of it can capture the tenor, the dynamic, the
essence of the evolutionary process that spawned cellular organization," Woese
wrote in his paper.

Going against traditional thinking is not new to Woese, a recipient of the
National Medal of Science (2000), and holder of the Stanley O. Ikenberry
Endowed Chair at Illinois.

In the late 1970s Woese identified the Archaea, a group of microorganisms that
thrive primarily in extremely harsh environments, as a separate life form from
the planet's two long-accepted lines - the typical bacteria and the eukaryotes
(creatures like animals, plants, fungi and certain unicellular organisms, whose
cells have a visible nucleus). His discovery eventually led to a revision of
biology books around the world.

The three primary divisions of life now comprise the familiar bacteria and
eukaryotes, along with the Archaea. Woese argues that these three life forms
evolved separately but exchanged genes, which he refers to as inventions, along
the way. He rejects the widely held notion that endosymbiosis (which led to
chloroplasts and mitochondria) was the driving force in the evolution of the
eukaryotic cell itself or that it was a determining factor in cellular
evolution, because that approach assumes a beginning with fully evolved cells.

His theory follows years of analysis of the Archaea and a comparison with
bacterial and eukaryote cell lines.

"The individual cell designs that evolved in this way are nevertheless
fundamentally distinct, because the initial conditions in each case are
somewhat different," Woese wrote in his introduction. "As a cell design becomes
more complex and interconnected a critical point is reached where a more
integrated cellular organization emerges, and vertically generated novelty can
and does assume greater importance."

Woese calls this critical point in a cell's evolutionary course the Darwinian
Threshold, a time when a genealogical trail, or the origin of a species,
begins. From this point forward, only relatively minor changes can occur in the
evolution of the organization of a given type of cell.

To understand cellular evolution, one must go back beyond the Darwinian
Threshold, Woese said.

His argument is built around evidence "from the three main cellular information
processing systems" - translation, transcription and replication - and he
suggests that cellular evolution progressed in that order, with translation
leading the way.

The pivotal development in the evolution of modern protein-based cells, Woese
said, was the invention of symbolic representation on the molecular level -
that is, the capacity to "translate" nucleic acid sequence into amino acid
sequence.

Human language is another example of the evolutionary potential of symbolic
representation, he argues. "It has set Homo sapiens entirely apart from its
(otherwise very close) primitive relatives, and it is bringing forth a new
level of biological organization," Woese wrote.

The advent of translation, he said, caused various archaic nucleic-based
entities to begin changing into proteinaceous ones, emerging as forerunners of
modern cells as genes and other individual components were exchanged among
them. The three modern types of cellular organization represent a mosaic of
relationships: In some ways one pair of them will appear highly similar; in
others a different pair will.

This, Woese said, is exactly what would be expected had they individually begun
as distinct entities, but during their subsequent evolutions they had engaged
in genetic cross-talk - they had indulged in a commerce of genes.

http://www.eurekalert.org/pub_releases/2002-06/uoia-nce061402.php